FastQCFastQC Report
Tue 4 Apr 2023
EGAF00005687024

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687024
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences87447401
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTAT3489610.39905245440056014TruSeq Adapter, Index 7 (97% over 36bp)
GGGGGCTTCAATCGGGAGTACTACTCGATTGTCAACGTCAAGGAGTCGCA1302530.14895011002099423No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)