Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005687468 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 14602798 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-76 |
%GC | 42 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 25743 | 0.17628813327418486 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
TGCGACG | 300 | 0.00393906 | 9.659462 | 63 |
GCGTCGT | 845 | 7.932358E-5 | 6.3561673 | 59 |
TCACTCG | 1220 | 7.710293E-4 | 6.250571 | 70 |
CGTCGTG | 940 | 4.99464E-5 | 6.112325 | 60 |
AGCGTCG | 1055 | 2.8478078E-4 | 5.4161873 | 58 |