FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687489

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687489
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19089957
Sequences flagged as poor quality0
Sequence length32-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATTGCG14750.022.5636710
ATTGCGT15500.020.80077211
TTGCGTT21700.015.33697412
GCGTTTT24250.014.01021614
CGTTTTG30650.011.42402515
TGCGTTT31200.011.22263813
GTATTGC50350.07.02306379
GTACAGT76300.05.17992354
AGTATTG73900.05.1133798