FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687538

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687538
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences11679821
Sequences flagged as poor quality0
Sequence length35-76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTACCGC5650.00211432166.904855760
AACCGAC5250.00881339056.68411454
ACGTATG10750.00162722826.406549570
Produced by FastQC (version 0.11.5)