FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687558

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687558
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15467555
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGT8955.217207E-68.445621570
ATCGGAT13153.592686E-87.801075570
GCGTCGT11002.9645562E-66.05160959
GATCGGG11300.00562755165.733627370
ATGTTCG11650.0078830455.56137270
AGCGTCG12705.769434E-65.51245258
GTTTGCG11850.009506765.467509370
Produced by FastQC (version 0.11.5)