FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687583

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687583
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14335866
Sequences flagged as poor quality0
Sequence length35-76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACCGACG8609.865275E-46.12416769
ACGAATT16054.507886E-55.76449770
TTCCGTC14654.7796464E-45.572385370
CGAACAT11800.0083130635.53460770
Produced by FastQC (version 0.11.5)