FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19432900
Sequences flagged as poor quality0
Sequence length35-76
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTACGCA41400.05.352298326
TGCGAAT42100.05.20851
AGTACGC42300.05.15655625
ACTGCGA48300.05.03893649
CGGTACA44850.05.02155437
TACGCAC44850.05.017831327
Produced by FastQC (version 0.11.5)