FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687654

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687654
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13052256
Sequences flagged as poor quality0
Sequence length35-76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGCGCAC9600.00490323836.372464770
CCGCGAA7652.3254812E-46.33630375
ATCCGAC6350.0090955126.0041332
CGCGAAG7200.0052553515.7691676
AGTACGC9506.289573E-45.459995325
GTACGCA9850.00102109335.266005526
Produced by FastQC (version 0.11.5)