FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687676

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687676
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14954790
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACGCC12400.00170769555.85025470
ACGGACG11500.0047414315.82286170
AGTACGC13759.3193376E-75.513868325
CGCGAAG12603.829087E-55.1966376
CGCATGA10100.00147187845.1233341
GTACGCA13652.6590282E-55.0493326
GCCGGTA15802.3809116E-65.023885735
Produced by FastQC (version 0.11.5)