Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005687692 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 12901489 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-76 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGCGAAG | 930 | 1.0779011E-5 | 6.3275423 | 6 |
GTACGCA | 1150 | 7.729339E-6 | 5.7189074 | 26 |
AGTACGC | 1245 | 2.9175359E-5 | 5.282545 | 25 |
CCGCGAA | 990 | 0.0010773609 | 5.244876 | 5 |
CCCGTCG | 1205 | 9.8224744E-5 | 5.1706815 | 23 |
AACTGCG | 1755 | 1.14554496E-7 | 5.1481857 | 48 |
GCCGGTA | 1280 | 4.585833E-5 | 5.140233 | 35 |
CCGTCGG | 1150 | 2.7129272E-4 | 5.1169763 | 24 |
TACGCAC | 1360 | 2.3122026E-5 | 5.090339 | 27 |
AAGTACG | 1515 | 5.418986E-6 | 5.026578 | 24 |