FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687704

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687704
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7587416
Sequences flagged as poor quality0
Sequence length35-76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CTCGCGA4550.0025087697.6057881
CTCCGCG5957.4920645E-57.56104851
CATACGC5050.006997366.84564614
ATTACGT6550.00185179436.33348757
CGAAAGG7953.8442254E-46.0941981
CGAAAAA10303.1674112E-45.3757421
TTTACGT8850.0090758335.0778221
Produced by FastQC (version 0.11.5)