Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005687712 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 3385428 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-76 |
%GC | 43 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
GCGAAAT | 150 | 0.006523853 | 13.802693 | 20 |
ACGCAGT | 275 | 2.2629835E-4 | 11.294114 | 10 |
AGGGGGG | 1540 | 9.094947E-12 | 8.647581 | 70 |
AAGGGGG | 1555 | 3.0131032E-6 | 6.423123 | 70 |
ATGGGGG | 1830 | 4.1687406E-5 | 5.4578996 | 70 |
AAAGGGG | 2240 | 6.6813973E-6 | 5.202061 | 70 |