FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687728

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687728
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16472811
Sequences flagged as poor quality0
Sequence length35-76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGACGCG7350.00289037547.49671570
TTAGCGT9200.00241632645.2734827
AGCGCAT13800.0070239945.1906670
Produced by FastQC (version 0.11.5)