FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15011672
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGCGAAG12707.6397555E-117.0860286
CCGCGAA13402.7102942E-106.71597435
TATGCCG7400.00107511636.08057817
CCCGCGA14801.7038474E-85.84739164
AGTACGC17952.0596781E-75.013362425
Produced by FastQC (version 0.11.5)