FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687734

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687734
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13104493
Sequences flagged as poor quality0
Sequence length35-76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTAGTA6300.00113715956.6129931
ACCGTTG7600.00142564475.939254843
CGCGAAG9701.3038948E-45.72004946
AGTACGC13101.16927495E-55.294325
TTGGACG9350.00293292665.192476717
Produced by FastQC (version 0.11.5)