FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005687751

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005687751
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13993505
Sequences flagged as poor quality0
Sequence length35-76
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGATAG7452.287184E-56.95138135
TATGCCG8651.6201426E-46.034251748
CGATAGA8407.979194E-45.75648936
TCTCGTA10305.105281E-55.717632343
CGTATGC9505.9416995E-45.48315646
AGCGATA10303.2921866E-45.361253734
TCGTATG10856.371409E-45.116739745
Produced by FastQC (version 0.11.5)