FastQCFastQC Report
Wed 1 Jun 2022
EGAF00005688068

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688068
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25597232
Sequences flagged as poor quality0
Sequence length36-51
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG489960.19141132134912087No Hit
CTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGTCCG415290.16224019847145973No Hit
GGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGAT359140.1403042328951818No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)