FastQCFastQC Report
Wed 1 Jun 2022
EGAF00005688458

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688458
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24840777
Sequences flagged as poor quality0
Sequence length51
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTTT485576419.54755279997884No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTTTT15406766.2022053496957845No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTATTTTTTTTTTT3683181.4827152950972506No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTTTTTTTTTTTTTTTTTTT3433381.3821548335625733No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGTTTTTTTTTTTTTTTTTTT2418560.9736249393487169No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTT2302140.9267584504301134No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTTTTTTTTTTTTTTTTTTTT2087640.8404084944685909No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTATTTTTTTTTTT1998640.804580307612761No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTTTTT1473230.5930692103552155No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTATTTTTTTTTTTTT1361570.548118925587553No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTATTTTTTTTTTTT1052380.42365019419481126No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTGTTTTTTT996900.4013159491750197No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTTG916510.36895383747456856No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGTTTTTTTTTTTTTTTTTTT914220.3680319661498511No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTATTTTTTTTTT907640.36538309570590327No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGTTTTTTTTTTTTTTTTTTT853150.34344738894439575No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTATTTTTTTTTTTTT710080.28585257216390614No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGTTTTTTTTTTTTTTTTTTT696260.2802891391038211No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTGTTTTTTTT691100.2782119093939775No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTTTTTTTTTTTTTTTTTT610940.24594238738989524No Hit
CCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAGT606730.2442475933824453No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGTTTTTTTTTTTTTTTTTTTT548140.2206613746421861No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG535760.21567763359415046No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGTTTTTTTTTTTTTTTTTTTT534940.21534753119840014No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTGT479180.19290056828737684No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTATTTTTTTTTTTT464620.187039237943322No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGTTTTTTTTTTTTTTTTTTT456090.1836053678997239No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGTTTTTTTTTTTTTTTTTTTT432520.17411693684138785No Hit
GGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGTTTTTTTTTTTTTTTTTTT430920.17347283460577742No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTGTT389040.1566134585886746No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTATTTTTTTTTT388160.15625920235908883No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGTTTTTTTTTTTTTTTTTTTT381620.15362643447103125No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTATATTTTTTTTTTT364160.1465976688249325No Hit
TCCTGCCAGTAGCATATGCTTGTCTCAAAGATTAAGCCATGCATGTCTAAG354030.142519696545724No Hit
GACTAATCGAACCATCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGAT352170.14177092769682687No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTGTTTTT343970.13846990373932344No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTTTTTTTTATTTTTTTTTTT343560.13830485254144828No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTGTTTTTTTT324000.13043070271111085No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTTTTTTTTTTTTTTTTT314310.1265298585466952No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTGTTTTTTTTTTTTTT311810.12552344880355393No Hit
GGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGTTTTTTTTTTTTTTTTTTT302150.12163468155605599No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTAATTTTTTTTTT299990.12076514353798193No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTTTTTTTTTTTTTTG282620.11377260864263625No Hit
GGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGTTTTTTTTTTTTTTTTTTT272820.10982748244952241No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTGTTTTTTTTTTTTTTT271640.10935245705075973No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGTTTTTTTATTTTTTTTTTT270830.10902638029398194No Hit
GATTAAGCCATGCATGTCTAAGTACGCACGGCCGGTACAGTGAAACTGCGA266970.1074724836505718No Hit
GGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGTTTTTTTTTTTTTTTTTTTT266740.1073798939542028No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTTTTTTATATTTTTTTTTTT258300.10398225466135781No Hit
TGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAGGT253600.10209020434425219No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)