FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005688594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6256579
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG15750.027.157782145
GCCGTAT47950.013.456257145
CGCCGTA49500.013.181358145
TGGTCGC84500.012.183007145
CGTATCA40950.011.330495145
TAGATCT220450.011.21417145
CCGTATC48650.010.878346145
AGTGTAG290100.010.720929145
AGATCTC218450.010.71947145
TCTCGGT152600.010.594322145
GATCTCG189150.010.578537145
GTGTAGA279750.010.521527145
GAGTGTA313800.010.41949145
GTGGTCG97000.010.388813145
TCGCCGT69250.09.945501145
GTAGATC288450.09.852317145
GGTCGCC93300.09.790655145
TGTAGAT285200.09.379931145
AAAGAGT405750.09.040966145
AGAGTGT350050.08.967691145
Produced by FastQC (version 0.11.5)