FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005688595

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688595
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59360689
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGTCACG905300.012.580616145
GTCACGC838050.011.937885145
CGTCTGA2415750.010.959659145
ACGTCTG2655200.010.266179145
ACACGTC3035450.010.222072145
CACGTCT2893250.010.213308145
AATCTCG283100.010.166438145
ACGCCAC749900.09.9575405145
CACACGT3358550.09.910001145
CGCCACA712550.09.889382145
CTCGTAT180900.09.658212145
TCTGAAC2450900.09.62521145
GCACACG3677750.09.294322145
GTCTGAA2626150.09.292077145
CTGAACT2442350.09.130545145
TCTCGTA233650.09.060148145
CACGCCA917100.08.790353145
TCGTATG166100.08.77293145
CCAGTCA1594950.08.749876145
AACTCCA2137950.08.663863145
Produced by FastQC (version 0.11.5)