FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005688613

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688613
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62351424
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGTATG435950.013.769097145
CGTATGC400050.013.699961145
CTCGTAT483650.013.4154005145
TATGCCG332550.013.341549145
TCTCGTA558250.012.323932145
ATCTCGT655850.011.871663145
CATCTCG850400.010.451509145
ATTGGCT1679150.010.055225145
GTATGCC515750.010.036235145
ACATTGG1919950.09.972184145
CATTGGC1880400.09.51881145
GTCACAT2371850.09.475154145
CACATTG2175250.09.355027145
AGTCACA2743350.09.161876145
TTGGCTC1825150.08.666984145
ATGCCGT416300.08.654894145
CAGTCAC2969100.08.497011145
TCACATT2564800.08.459896145
CCAGTCA3100550.08.452425145
TCCAGTC3312750.08.392445145
Produced by FastQC (version 0.11.5)