FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005688653

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688653
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62118847
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[WARN]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCACGAC622500.012.577239145
GTCACGA687650.011.986544145
CGACAGT506950.011.540093145
AGTCACG813450.011.433962145
CACGACA645150.011.090661145
ACGACAG618450.011.041987145
CGTCTGA2078750.010.54931145
ACGTCTG2292150.09.978316145
ACACGTC2588900.09.954633145
CACGTCT2505850.09.815891145
CACACGT2887700.09.697807145
GCACACG3166100.09.080903145
TCTGAAC2199300.08.926169145
CTCGTAT177150.08.839212145
GTCTGAA2360100.08.6651145
TCGTATG163550.08.599082145
CTGAACT2220200.08.482971145
CGGAAGA4800350.08.315039145
AGCACAC3673000.08.253992145
TCGGAAG4981550.08.140647145
Produced by FastQC (version 0.11.5)