FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005688776

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688776
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55803519
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG231100.012.674613145
GCCGTAT342950.011.92344145
CGCCGTA374500.011.693336145
CGTATCA289650.011.2890215145
ATCTCGG1261650.011.004827145
CCGTATC338550.010.87913145
GATCTCG1327450.010.847117145
TCTCGGT1121450.010.835462145
TGGTCGC620300.010.776616145
TAGATCT1577000.010.744354145
AGTGTAG2154500.010.660853145
GTCGCCG562800.010.589392145
GAGTGTA2257750.010.301769145
GTGTAGA2089650.010.238797145
GTGGTCG729800.010.163073145
TCGCCGT464200.010.105375145
TGTAGAT2161750.09.96103145
CGGTGGT979550.09.940373145
GGTCGCC636250.09.879719145
TCGGTGG1039300.09.696772145
Produced by FastQC (version 0.11.5)