FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005688818

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688818
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8680912
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG24750.039.54462145
AGAGCGG54000.013.15713145
GATCTCG190600.012.894532145
TCTCGGT147400.012.88643145
GTGGTCG80200.012.474798145
CGCCGTA34350.012.452431145
AGTGTAG319300.012.351758145
GAGTGTA345050.012.333458145
TGGTCGC67950.012.056404145
GCCGTAT34450.011.995393145
GTGTAGA306150.011.8877125145
TAGATCT231050.011.82944145
AGAGTGT399150.011.460988145
GTAGATC329950.011.184034145
GTCGTGG48100.011.15361145
TGTAGAT325600.010.799066145
AAGAGTG479200.010.6054735145
GTCGCCG63150.010.56193145
TCGCCGT55600.010.561828145
AGATCTC226250.010.382101145
Produced by FastQC (version 0.11.5)