FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005688915

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688915
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7512739
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATCTCG57100.013.5853195145
TCTCGTA50900.012.391494145
CTCGTAT46400.011.718323145
CGTATGC36650.011.670789145
TCGTATG41300.010.532304145
ATCTCGT54800.010.318968145
TCCAGTC325950.010.053323145
ACACGTC654800.010.030942145
CGTCTGA532250.010.011378145
GTCACAC231400.09.931575145
ACGTCTG580750.09.886855145
TATGCCG31850.09.787713145
GTATCTC90450.09.778527145
TGAACTC471300.09.690927145
TCTGAAC511800.09.561493145
GTCTGAA556650.09.455327145
CTCCAGT378050.09.41574145
CACGTCT631500.09.413751145
CCAGTCA302800.09.361448145
CACACGT708450.09.312245145
Produced by FastQC (version 0.11.5)