FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005688975

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688975
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7229333
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTCGT130400.013.844042145
CGTCGTA118150.013.254435145
TATGCCG30850.013.16055145
TCGTAGA104850.012.861324145
GTCACGT183100.012.037227145
CGTAGAA93600.011.77359145
CTCGTAT48000.011.630294145
GTCGTAG113750.011.217665145
AGTCACG196600.011.10003145
ATCTCGT55400.010.731125145
TCACGTC182650.010.360054145
CACGTCG157150.010.334151145
TCTCGTA52100.09.740954145
CGTCTGA479700.09.491417145
ACGTCTG517800.09.311095145
TCGTATG40900.09.217671145
ACACGTC575750.09.1420555145
AACTCCA388050.09.136131145
TCTGAAC473500.09.079792145
TCCAGTC309150.09.075758145
Produced by FastQC (version 0.11.5)