FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005688980

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688980
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51910611
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGTCGG247150.016.369226145
TGGTCGC638700.012.838676145
GCCGTAT336100.012.684209145
CGCCGTA365750.012.3695755145
CGTATCA277650.012.168662145
GTGGTCG756400.011.617312145
GATCTCG1418250.011.512514145
GGTCGCC629600.011.504171145
GTCGCCG563350.011.46711145
ATCTCGG1338350.011.3818145
TCGCCGT464200.011.198725145
TAGATCT1661150.011.151586145
TCTCGGT1189300.010.95497145
CCGTATC327600.010.888694145
AGTGTAG2311100.010.870237145
GAGTGTA2432150.010.830029145
TCGGTGG1080350.010.804782145
GTGTAGA2214300.010.562882145
CTCGGTG1267000.010.283146145
AGATCTC1786900.010.245088145
Produced by FastQC (version 0.11.5)