FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005688985

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005688985
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5868786
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CACAACG103000.013.725141145
CGTGATA56200.013.673792145
AACGTGA77600.013.079336145
ACAACGT88750.012.579743145
CAACGTG100150.012.016459145
CTCGTAT32000.012.0072975145
ACGTGAT68850.012.003843145
TCACAAC133500.011.295397145
CGTCTGA368450.011.038338145
ACGTCTG404550.010.895591145
GTCACAA154700.010.450425145
TGAACTC330000.010.347284145
ATCTCGT37700.010.191872145
ACACGTC457400.010.143859145
CTGAACT353400.010.0314045145
AACTCCA283600.09.995165145
CACACGT500500.09.951122145
TCTCGTA35750.09.936637145
CACGTCT441950.09.84232145
GTCTGAA389650.09.749358145
Produced by FastQC (version 0.11.5)