FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005689077

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005689077
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences58402851
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGTGATA535900.014.542807145
CACAACG990450.013.094873145
ACAACGT893850.013.058243145
TATCTCG308700.012.963611145
ACGTGAT691050.012.683537145
CTCGTAT246200.012.573709145
TCGTATG223600.012.191006145
AACGTGA813900.011.811254145
CAACGTG973500.011.47599145
TCACAAC1291150.011.392757145
GTCACAA1443200.011.02132145
CGTCTGA3569650.010.246111145
ATCTCGT382150.010.168443145
ACGTCTG3882850.010.116072145
CGTATGC216600.010.007746145
TCTCGTA303950.09.946205145
GTGATAT681750.09.889659145
CACGTCT4207550.09.883331145
ACACGTC4408650.09.843615145
CTGAACT3350600.09.823286145
Produced by FastQC (version 0.11.5)