FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005689119

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005689119
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8453076
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATGCCG50000.015.369169145
ATCTCGT93700.015.009861145
TCGTATG69750.014.343311145
CGTATGC61300.014.073464145
TCTCGTA85300.013.513337145
CTCGTAT77000.012.992805145
GCCAATC161350.011.547253145
CCAATCT161200.011.378108145
GTATGCC74950.010.446401145
AGTCACC435000.010.032791145
GTCACCT410650.09.833268145
CCAGTCA513750.09.412144145
TCCAGTC549050.09.387981145
ATGCCGT66350.09.287365145
CAGTCAC495300.09.162639145
AGCCAAT201400.09.107005145
AACTCCA677650.09.018549145
TCTGAAC844900.09.0008745145
CTCCAGT613300.08.971877145
CGTCTGA889400.08.729853145
Produced by FastQC (version 0.11.5)