FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005689173

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005689173
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55649331
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATCGATC377250.013.164248145
AACATCG637600.012.54186145
ACATCGA611600.011.877771145
CTCGTAT236100.010.77819145
GTCACAA1338250.010.715779145
CGTCTGA3257450.010.625256145
ACGTCTG3553350.010.44232145
CATCGAT494450.010.205201145
CGTATGC209150.010.191173145
TCGTATG221600.010.1747875145
ACACGTC4041650.09.959223145
CACGTCT3860250.09.940796145
CTGAACT3065600.09.826305145
GTCTGAA3388050.09.710674145
TCTGAAC3137000.09.695097145
CAGTCAC1841600.09.593895145
AGTCACA1665350.09.533959145
TCTCGTA289400.09.519625145
CACACGT4443350.09.4830885145
TGAACTC2981150.09.433453145
Produced by FastQC (version 0.11.5)