FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005689215

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005689215
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55527180
Sequences flagged as poor quality0
Sequence length151
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCGCAAA125350.014.401454145
CGTATGC494000.014.000797145
CTCGTAT592300.013.9049015145
TCGTATG539950.013.386681145
TATGCCG403900.013.10329145
CGCAATC1016250.012.755523145
ATCGCAA1301900.012.618671145
AATCTCG811950.012.447004145
GATCGCA1463650.012.437721145
TCTCGTA670450.012.41386145
ATCTCGT771300.012.294638145
TCGCAAT1094600.011.955097145
AGATCGC1662450.011.451898145
GTATGCC586050.010.861534145
GCAATCT1213550.010.341195145
ATGCCGT464300.010.211991145
CAATCTC1254400.09.357119145
ACAGATC2710850.09.205275145
AGTCACA3086600.09.205051145
CAGTCAC3343850.08.943521145
Produced by FastQC (version 0.11.5)