FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005689771

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005689771
File typeConventional base calls
EncodingIllumina 1.5
Total Sequences2039060
Sequences flagged as poor quality0
Sequence length43
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT37110.18199562543524958No Hit
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT30280.14849979892695653No Hit
GTATTAGAGGCACCGCCTGCCCAGTGACACATGTTTAACGGCC27210.13344384177022744No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCG22110.10843231685188273No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT21750.10666679744588192No Hit
CTCTAATACTGGTGATGCTAGAGGTGATGTTTTTGGTAAACAG21710.10647062862299295No Hit
AGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTCGCCC21040.10318480083960256No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)