FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005709054

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709054
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24870721
Sequences flagged as poor quality0
Sequence length25-361
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAATGAGCGGTTCCGCTGCCCTGAGGCACTCTTCCAGCCTTCCTTCCT665630.2676359885183867No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTAGTTTCGTGGATGCCAC629070.25293597238294785No Hit
CAATGGGGTACTTCAGGGTCAGGATGCCACGCTTGCTCTGGGCCTCGTCG531460.2136890201132488No Hit
GGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCT489600.1968579841332304No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTCGTGGATGCCGC447380.17988219963546695No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)