FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005709055

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709055
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30506094
Sequences flagged as poor quality0
Sequence length25-366
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAATGAGCGGTTCCGCTGCCCTGAGGCACTCTTCCAGCCTTCCTTCCT909960.29828794207478676No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTAGTTTCGTGGATGCCAC864910.283520400874658No Hit
CAATGGGGTACTTCAGGGTCAGGATGCCACGCTTGCTCTGGGCCTCGTCG571200.18724127710351904No Hit
GGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCT558290.183009335774026No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTCGTGGATGCCGC504920.16551447064970035No Hit
CCATCGTCGGCGCCCCAGACACCAGGGCGTCATGGTGGGCATGGGCCAGA395600.12967900774186297No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)