FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005709057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20119937
Sequences flagged as poor quality0
Sequence length25-356
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAATGAGCGGTTCCGCTGCCCTGAGGCACTCTTCCAGCCTTCCTTCCT297390.1478086139136519No Hit
GGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCT293750.14599946311959128No Hit
CAATGGGGTACTTCAGGGTCAGGATGCCACGCTTGCTCTGGGCCTCGTCG290370.14431953738224926No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTCGTGGATGCCGC287370.14282847903549598No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTAGTTTCGTGGATGCCAC285670.1419835459723358No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)