FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005709066

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709066
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23586798
Sequences flagged as poor quality0
Sequence length25-362
%GC50

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCAATGAGCGGTTCCGCTGCCCTGAGGCACTCTTCCAGCCTTCCTTCCT793020.3362135038422765No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTAGTTTCGTGGATGCCAC734040.31120799016466755No Hit
CAATGGGGTACTTCAGGGTCAGGATGCCACGCTTGCTCTGGGCCTCGTCG504570.21392051604461107No Hit
GGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCT493010.2090194692810783No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTCGTGGATGCCGC456550.19356166954073206No Hit
GAAACCCAGACACATAGCAATTCAGGAAATTTGACTTTCCATTCTCTGCT244940.10384622787713703No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)