FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005709071

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709071
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20166803
Sequences flagged as poor quality0
Sequence length25-359
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGGGGTACTTCAGGGTCAGGATGCCACGCTTGCTCTGGGCCTCGTCG360650.17883350177021118No Hit
GGCAATGAGCGGTTCCGCTGCCCTGAGGCACTCTTCCAGCCTTCCTTCCT323810.16056585667048962No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTAGTTTCGTGGATGCCAC310260.15384689382843675No Hit
GGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCT302620.150058489687235No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTCGTGGATGCCGC282580.14012136678282622No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)