FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005709076

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709076
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8130890
Sequences flagged as poor quality0
Sequence length25-361
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGGGGTACTTCAGGGTCAGGATGCCACGCTTGCTCTGGGCCTCGTCG248830.3060304591502283No Hit
GGCAATGAGCGGTTCCGCTGCCCTGAGGCACTCTTCCAGCCTTCCTTCCT227270.27951429671290595No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTAGTTTCGTGGATGCCAC215770.26537070357611525No Hit
GGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCT215240.2647188684141588No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTCGTGGATGCCGC188720.23210251276305546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)