FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005709078

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709078
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21059470
Sequences flagged as poor quality0
Sequence length25-355
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGGGGTACTTCAGGGTCAGGATGCCACGCTTGCTCTGGGCCTCGTCG297830.14142331217262352No Hit
GGCAATGAGCGGTTCCGCTGCCCTGAGGCACTCTTCCAGCCTTCCTTCCT276160.13113340459185346No Hit
GGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCT269670.1280516556209629No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTAGTTTCGTGGATGCCAC256630.12185966693368827No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTCGTGGATGCCGC252560.11992704469770607No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)