FastQCFastQC Report
Wed 11 May 2022
EGAF00005709084

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709084
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30984254
Sequences flagged as poor quality0
Sequence length25-369
%GC51

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGGGGTACTTCAGGGTCAGGATGCCACGCTTGCTCTGGGCCTCGTCG636520.20543337916091187No Hit
GGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCT573470.18508433348112882No Hit
GGCAATGAGCGGTTCCGCTGCCCTGAGGCACTCTTCCAGCCTTCCTTCCT521490.16830807028628156No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTCGTGGATGCCGC521370.16826934093685134No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTAGTTTCGTGGATGCCAC496400.16021040880958437No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)