FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005709088

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709088
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences23737337
Sequences flagged as poor quality0
Sequence length25-365
%GC52

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAATGGGGTACTTCAGGGTCAGGATGCCACGCTTGCTCTGGGCCTCGTCG394440.16616859759795297No Hit
GGCAATGAGCGGTTCCGCTGCCCTGAGGCACTCTTCCAGCCTTCCTTCCT376000.158400245149656No Hit
GGCAATGAGCGGTTCCGGTGTCCGGAGGCGCTGTTCCAGCCTTCCTTCCT370930.15626436950362207No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTAGTTTCGTGGATGCCAC364190.15342496085386495No Hit
GTCCACGTCACACTTCATGATGGAGTTGAAGGTGGTCTCGTGGATGCCGC348440.1467898442019844No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)