FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005709802

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709802
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1844693
Sequences flagged as poor quality0
Sequence length10-61
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTT25830.1400232992698514No Hit
TTTTTTTTTTTTT25240.1368249350976016No Hit
TTTTTTTTTTTTTT23530.12755509995430134No Hit
TTTTTTTTTTT23360.12663353739619546No Hit
TTTTTTTTTTTTTTT21310.11552057713668344No Hit
TTTTTTTTTT20700.11221379383995059No Hit
TTTTTTTTTTTTTTTT18790.10185976745181989No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)