FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005709805

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709805
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences375369
Sequences flagged as poor quality0
Sequence length10-85
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAA6270.16703563693325768No Hit
AAAAAAAAAAAA6080.1619739509655832No Hit
AAAAAAAAAAA6030.16064192834251098No Hit
AAAAAAAAAAAAAA5550.14785451116101758No Hit
AAAAAAAAAA5170.1377311392256686No Hit
AAAAAAAAAAAAAAA4860.12947259896262078No Hit
AAAAAAAAAAAAAAAA4460.11881641797804295No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)