FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005709806

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005709806
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences375369
Sequences flagged as poor quality0
Sequence length10-61
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTT6260.16676923240864322No Hit
TTTTTTTTTTTTT6170.1643715916871132No Hit
TTTTTTTTTTT6030.16064192834251098No Hit
TTTTTTTTTTTTTT5880.15664586047329426No Hit
TTTTTTTTTTTTTTT5350.14252642066872864No Hit
TTTTTTTTTTTTTTTT5100.13586630755336748No Hit
TTTTTTTTTT5060.1348006894549097No Hit
TTTTTTTTTTTTTTTTT4450.11855001345342848No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)