FastQCFastQC Report
Thu 23 Jun 2022
EGAF00005711352

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005711352
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences557544
Sequences flagged as poor quality0
Sequence length10-61
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT11260.2019571549509994No Hit
TATTACCGGCC9890.1773851032384888No Hit
GGAAGAGCGTCGTGCCCCTATAGTGAGTCGTATTACCGGCC8020.14384514944112034Clontech Universal Primer Mix Short (95% over 21bp)
TATTACCGGC5840.10474509635113999No Hit
CGGAAGAGCGTCGTGCCCCTATAGTGAGTCGTATTACCGGCC5650.10133729355889401Clontech Universal Primer Mix Short (95% over 21bp)

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)