FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005711362

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005711362
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences225053
Sequences flagged as poor quality0
Sequence length10-61
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TATTACCGGCC5080.22572460709255154No Hit
GGAAGAGCGTCGTGCCCCTATAGTGAGTCGTATTACCGGCC4950.21994818998191537Clontech Universal Primer Mix Short (95% over 21bp)
AAGAGCGTCGTGCCCCTATAGTGAGTCGTATTACCGGCC3020.13419061287785544Clontech Universal Primer Mix Short (95% over 21bp)
GAAGAGCGTCGTGCCCCTATAGTGAGTCGTATTACCGGCC2520.11197362399079328Clontech Universal Primer Mix Short (95% over 21bp)
GTCGTGCCCCTATAGTGAGTCGTATTACCGGCC2510.11152928421305204Clontech Universal Primer Mix Short (95% over 21bp)
TATTACCGGC2400.10664154665789836No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)