FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005711385

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005711385
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences229795
Sequences flagged as poor quality0
Sequence length10-85
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAA3860.16797580452142127No Hit
AAAAAAAAAAA3800.16536478165321264No Hit
AAAAAAAAAA3690.1605779063948302No Hit
AAAAAAAAAAAAA3260.14186557583933504No Hit
AAAAAAAAAAAAAA2870.12489392719597903No Hit
AAAAAAAAAAAAAAA2460.10705193759655346No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)