FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005711387

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005711387
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences226077
Sequences flagged as poor quality0
Sequence length10-85
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAA3500.15481451010054098No Hit
AAAAAAAAAAAA3360.14862192969651933No Hit
AAAAAAAAAAAAA3360.14862192969651933No Hit
AAAAAAAAAAA3350.1481796025248035No Hit
AAAAAAAAAAAAAA2700.11942833636327446No Hit
AAAAAAAAAAAAAAA2320.10261990383807287No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)