FastQCFastQC Report
Thu 23 Jun 2022
EGAF00005711397

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005711397
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences494770
Sequences flagged as poor quality0
Sequence length10-85
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAA7160.14471370535804515No Hit
AAAAAAAAAAAA6950.14046930897184548No Hit
AAAAAAAAAA6630.13400165733573174No Hit
AAAAAAAAAAAAA5850.11823675647270449No Hit
AAAAAAAAAAAAAA5030.101663399155163No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)